Neuroscience Faculty Members Named AAAS Fellows

Leslie Griffith & Gina Turrigiano-2017 AAAS Fellows

Leslie Griffith (left) and Gina Turrigiano (right)

Leslie Griffith and Gina Turrigiano have been named American Association for the Advancement of Science (AAAS) Fellows for 2017. This is in recognition of their contributions and scientific leadership in the field of Neuroscience.

Leslie Griffith, Nancy Lurie Marks Professor of Neuroscience and Director of the Volen Center for Complex Systems, studies sleep and memory using Drosophila melanogaster.

Gina Turrigiano is the Joseph Levitan Professor of Vision Science. Her lab studies the mechanisms of homeostatic synaptic plasticity and their effects in developing and functioning cortex.

Vice Provost for Research Edward Hackett is also a 2017 AAAS Fellow in the Section on History and Philosophy in Science.

Griffith, Turrigiano, Hackett and the other Fellows for 2017 will be recognized on Saturday, Feb. 17, 2018 at the 2018 AAAS Annual Meeting in Austin, Texas.

Read more at BrandeisNow.

Neurons that make flies sleep

Sleep is known to be regulated by both intrinsic (what time is it?) and environmental factors (is it hot today?). How exactly these factors are integrated at the cellular level is a hot topic for investigation, given the prevalence of sleep disorders. Researchers in the Rosbash and Griffith labs are pursuing the question in the fruit fly Drosophila melanogaster, to take advantage of the genetic tools in the model system and the excellent understanding of circadian rhythms in the fly.

Like other animals, the fruit fly displays a robust activity/sleep pattern, which consists of a morning (M) activity peak, a middle-day siesta, an evening (E) activity peak and nighttime sleep. M and E peaks are controlled by different subgroups of circadian neurons such as wake-promoting M and E clock cells.

In a paper just published in Nature, Brandeis postdoctoral fellow Fang Guo and coworkers identify a small group of circadian neurons, a subset of the glutamatergic DN1 (gDN1s) cells, which have a critical role in both types of regulation. The authors manipulated the gDN1s activity by using recently developed optogenetics tools, and found activity of those neurons is both necessary and sufficient to promote sleep.

circadian-feedback

The cartoon model illustrates how the circadian neuron negative feedback set the timing of activity and siesta of Drosophila. The arousal-promoting M cells (sLNv) release pigment-dispersing factor (PDF) peptide to promote M activity at dawn. PDF peptide can activate gDN1s, which release glutamate to inhibit arousal-promoting M and E (LNds) cells and cause a middle-day siesta. At evening, the gDN1s activity is reduced to trough levels and release E cell activity from inhibition.

DN1s enhance baseline sleep by acting as feedback inhibitors of previously identified wake-promoting M and E clock cells, making them the first known sleep-promoting neurons in this circadian circuit. It is already known that M cell can activate gDN1s at dawn. Thus the daily activity-sleep pattern of Drosophila is timed by the circadian neuron negative feedback circuitry (see Figure).  More interestingly, by using in vivo calcium reporters, the authors reveal that the activity of the gDN1s is also shown to be sexually dimorphic, explaining the well-known difference in daytime sleep between males and females. DN1s also have a key role in mediating the effects of temperature on daytime sleep. The circadian and environmental responsiveness of gDN1s positions them to be key players in shaping sleep to the needs of the individual animal.

Authors on the paper include postdocs Guo, Junwei Yu and Weifei Luo, staff member Kate Abruzzi, and Brandeis graduate Hyung Jae Jung ’15 (Biology/HSSP).

Guo F, Yu J, Jung HJ, Abruzzi KC, Luo W, Griffith LC, Rosbash M. Circadian neuron feedback controls the Drosophila sleep-activity profile. Nature. 2016.

Fruit flies alter their sleep to beat the heat

Do you have trouble sleeping at night in the summer when it is really hot?

Does a warm sunny day make you want to take a nap?

You are not alone — fruit flies also experience changes in their sleep patterns when ambient temperature is high. In a new paper in Current Biology, research scientist Katherine Parisky and her co-workers from the Griffith lab show that hot temperatures cause animals to sleep more during the day and less at night, and then investigate the mechanisms governing the behavior.

The increase in daytime sleep is caused by a complex interplay between light and the circadian clock. The balance between daytime gains and nighttime losses at high temperatures is also influenced by homeostatic processes that work to keep total daily sleep amounts constant. This study shows how the nervous system deals with changes caused by environmental conditions to maintain normal operations.

Parisky KM, Agosto Rivera JL, Donelson NC, Kotecha S, Griffith LC. Reorganization of Sleep by Temperature in Drosophila Requires Light, the Homeostat, and the Circadian Clock. Curr Biol. 2016.

Sleep suppresses brain rebalancing

Why humans and other animals sleep is one of the remaining deep mysteries of physiology. One prominent theory in neuroscience is that sleep is when the brain replays memories “offline” to better encode them (“memory consolidation”). A prominent and competing theory is that sleep is important for re-balancing activity in brain networks that have been perturbed during learning while awake. Such “rebalancing” of brain activity involves homeostatic plasticity mechanisms that were first discovered at Brandeis University, and have been thoroughly studied by a number of Brandeis labs including the Turrigiano lab. Now, a study from the Turrigiano lab just published in the journal Cell shows that these homeostatic mechanisms are indeed gated by sleep and wake, but in the opposite direction from that theorized previously: homeostatic brain rebalancing occurs exclusively when animals are awake, and is suppressed by sleep. These findings raise the intriguing possibility that different forms of brain plasticity – for example those involved in memory consolidation and those involved in homeostatic rebalancing – must be temporally segregated from each other to prevent interference.

sleeprats

The requirement that neurons carefully maintain an average firing rate, much like the thermostat in a house senses and maintains temperature, has long been suggested by computational work. Without homeostatic (“thermostat-like”) control of firing rates, models of neural networks cannot learn and drift into states of epilepsy-like saturation or complete quiescence. Much of the work in discovering and describing candidate mechanisms continues to be conducted at Brandeis. In 2013, the Turrigiano Lab provided the first ­in vivo evidence for firing rate homeostasis in the mammalian brain: lab members recorded the activity of individual neurons in the visual cortex of freely behaving rat pups for 8h per day across a nine-day period during which vision through one eye was occluded. The activity of neurons initially dropped, but over the next 4 days, firing rates came back to basal levels despite the visual occlusion. In essence, these experiments confirmed what had long been suspected – the activity of neurons in intact brains is indeed homeostatically governed.

Due to the unique opportunity to study a fundamental mechanism of brain plasticity in an unrestrained animal, the lab has been probing the possibility of an intersection between an animal’s behavior and homeostatic plasticity. In order to truly evaluate possible circadian and behavioral influences on neuronal homeostasis, it was necessary to capture the entire 9-day experiment, rather than evaluate snapshots of each day. For this work, the Turrigiano Lab had to find creative computational solutions to recording many terabytes of data necessary to follow the activity of single neurons without interruption for more than 200 hours. Ultimately, these data revealed that the homeostatic regulation of neuronal activity in the cortex is gated by sleep and wake states. In a surprising and unpredicted twist, the homeostatic recovery of activity occurred almost exclusively during periods of activity and was inhibited during sleep. Prior predictions either assumed no role for behavioral state, or that sleeping would account for homeostasis. Finally, the lab established evidence for a causal role for active waking by artificially enhancing natural waking periods during the homeostatic rebound. When animals were kept awake, homeostatic plasticity was further enhanced.

This finding opens doors onto a new field of understanding the behavioral, environmental, and circadian influences on homeostatic plasticity mechanisms in the brain. Some of the key questions that immediately beg to be answered include:

  • What it is about sleep that precludes the expression of homeostatic plasticity?
  • How is it possible that mechanisms requiring complex patterns of transcription, translation, trafficking, and modification can be modulated on the short timescales of behavioral state-transitions in rodents?
  • And finally, how generalizable is this finding? As homeostasis is bidirectional, does a shift in the opposite direction similarly require wake or does the change in sign allow for new rules in expression?

Authors on the paper include postdoctoral fellow Keith Hengen, Neuroscience grad student Alejandro Torrado Pachedo, and Neuroscience undergraduate James McGregor ’14 (now in grad school at Emory).

Hengen KB, Torrado Pacheco A, McGregor JN, Van Hooser SD, Turrigiano GG. Neuronal Firing Rate Homeostasis is Inhibited by Sleep and Promoted by Wake. Cell. 2016.

Sleep and memory are connected by a pair of neurons in Drosophila

In a recent post on the Fly on the Wall blog, Neuroscience grad student Bethany Christmann talks about recently published research from Leslie Griffith’s lab:

 … [How are sleep and behavior] connected in the brain? Does sleep simply permit memory storage to take place, such that the part of the brain involved in memory just takes advantage of sleep whenever it can? Or are sleep and memory physically connected, and the same mechanism in the brain is involved in both? In a recent study published in eLife, researchers in the Griffith lab may have [uncovered the answer]. They found that a single pair of neurons, known as the DPM neurons, are actively involved in both sleep and memory storage in fruit flies.

Haynes PR, Christmann BL, Griffith LC. A single pair of neurons links sleep to memory consolidation in Drosophila melanogaster. eLife. 2015;4.

To sleep, perchance to learn?

Sleep deprivation is ubiquitous in today’s society, and we have all felt the effects of sleep loss on our ability to function optimally, physically and especially mentally. In particular, it has become clear that the brain requires sleep to efficiently establish many forms of long-term memory. However, it is still unknown what sleep deprivation actually does to the brain to impair its function. In a recently published review in the journal Cellular Signalling, authors Christopher G. Vecsey from Brandeis University and Robbert Havekes and Ted Abel from the University of Pennsylvania have tried to capture the current state of our knowledge about the molecular and cellular effects of sleep deprivation that could explain why sleep loss is so detrimental for memory formation. The review focuses primarily on memories for events and places, which are thought to be formed and stored in the area of the brain called the hippocampus.

A key approach to learn about the nitty-gritty effects of sleep deprivation has been research in rodents. Therefore, the authors begin by summarizing how sleep deprivation studies are carried out in rodents, and how sleep deprivation affects memory and several signaling pathways in the brain. Notably, they review the effects of sleep loss on neurotransmitter systems such as acetylcholine, glutamate, and GABA, all of which could potentially modulate learning and memory. The authors also discuss some of the newest and most exciting studies on the topic of sleep loss, including a handful of experiments in which researchers have been able to reverse the effects of sleep deprivation through pharmacological treatments. For example, the authors describe one of their own studies in which sleep deprivation in mice caused memory deficits and reduced signaling through the cAMP pathway, which is known to be crucial for long-term memory. This molecular effect was likely caused by accelerated breakdown of cAMP by phosphodiesterase 4 (PDE4). When mice were treated with a PDE4 inhibitor during the period of sleep deprivation, memory formation remained unaffected. Rescue of memory defects were also obtained in separate studies in which rodents were treated either with nicotine, caffeine, or CPT, an antagonist of the adenosine A1 receptor. Two related studies also found that the effects of sleep deprivation on memory could be ameliorated by prevention of transmitter release from cells in the brain called glia. This was the first indication that brain cells other than neurons are impacted by sleep deprivation and that they contribute to the effects of sleep loss on the ability to remember new information.

As the authors mention, goals for studies in the immediate future will be to identify additional ways that sleep deprivation affects the brain, determine why sleep deprivation targets these molecules, and discover how these targets interact with each other to impair the normal function of the brain. Finally, hopefully our growing knowledge can be used to develop treatments for the cognitive deficits produced by sleep loss in people, especially those who have impaired sleep due to a medical condition, such as insomnia, chronic pain, sleep apnea, or one of the many neurodegenerative or psychiatric disorders associated with disturbed sleep patterns.

Christopher G. Vecsey is a postdoctoral fellow in the Griffith Lab at Brandeis, where he continues to work on interactions between sleep and learning. Chris is supported by a postdoctoral fellowship from the National Institute of Mental Health.

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