Goode, Gelles and Kondev labs synergize in discovery of a new synergistic actin depolymerization mechanism

Shashank Shekhar, Jane Kondev, Jeff Gelles and Bruce Goode

Shashank Shekhar, Jane Kondev, Jeff Gelles and Bruce Goode

All animal and plant cells contain a highly elaborate system of filamentous protein polymers called the actin cytoskeleton, a scaffold that can be rapidly transformed to alter a cell’s shape and function. A critical step in reconfiguring this scaffold is the rapid disassembly (or turnover) of the actin filaments. But how is this achieved? It has long been known that the protein Cofilin plays a central role in this process, but it has been unclear how Cofilin achieves this feat. Cofilin can sever actin filaments into smaller fragments to promote their disassembly, but whether it also catalyzes subunit dissociation from filament ends has remained uncertain and controversial. Until now, this problem has been difficult to address because of limitations in directly observing Cofilin’s biochemical effects at filament ends. However, a new study published in Nature Communications led by postdoctoral associate Dr. Shashank Shekhar, jointly mentored by Bruce Goode, Jeff Gelles and Jane Kondev, uses microfluidics-assisted single molecule TIRF imaging to tackle the problem.

The new study shows that Cofilin and one other protein (Srv2/CAP) intimately collaborate at one end of the actin filament to accelerate subunit dissociation by over 300-fold! These are the fastest rates of actin depolymerization ever observed. Further, these results establish a new paradigm in which a protein that decorates filament sides (Cofilin) works in concert with a protein that binds to filament ends (Srv2/CAP) to produce an activity that is orders of magnitude stronger than the that of either protein alone.

Video of cofilin and Srv2/CAP collaborating

The work was funded by National Institutes of Health, National Science Foundation MRSEC and Simons Foundation grant.

MRSEC & RTI Hosts Science Outreach to Waltham Teachers

The Brandeis Materials Research Science and Engineering Center (MRSEC) and the Brandeis Research Technology and Innovation (or MakerLab) hosted a day of science and technology outreach on November 5, 2019. In the morning and for the fifth straight year, 23 Waltham High School Science teachers participated in a professional development workshop with 15 Brandeis scientists called, “Brandeis Scientists in the Classroom.” The teams of scientists and teachers visited laboratories and developed curriculum for the scientists to make future classroom visits to the High School to increase awareness of Brandeis science and to encourage WHS students to pursue STEM careers. In the afternoon, the teams were joined by more than 60 Brandeis students, staff and members of the greater community for a public event called, “Watch:City Science and Technology Forum.” This event celebrated Waltham and Brandeis as hubs of technology and discovery and promoted SciLinkR.com as a way to connect with professionals and promote science. There were short talks about public engagement with science by Waltham High School teachers Marisa Maddox and Ellen Stanton and by Brandeis scientists, Professor Avi Rodal, Dr. Anique Olivier-Mason, Dr. Vivek Vimal, and Raul Ramos. Participants also networked with each other during the poster session (20 posters by Brandeis scientists) and explored the gallery of Brandeis contributions to the Journal of Stories in Science. The organizers’ goal was for attendees to gain new perspectives in science and technology.

The event was sponsored by the Brandeis MRSEC, Research Technology & Innovation, Library, Hassenfeld Family Innovation Center, Nova BioMedical, AstraZeneca, and the New England Journal of Medicine.

 

 

 

 Basketball, Dancing Proteins, and Life-saving Drugs

Dorothee Kern, Brandeis Magazine article

Dorothee Kern (center) with students in her Brandeis lab. (Image: Mike Lovett)

The Fall 2019 issue of Brandeis Magazine features a cover story on Professor of Biochemistry and HHMI Investigator Dorothee Kern.  The article describes Kern’s trajectory from her youth and education in the former East Germany to her current research and teaching at Brandeis to her co-founding of Relay Therapeutics, a Cambridge company pioneering new approaches to anti-cancer drug discovery.

 

Alumni and Student Researchers Wow Crowd at 2019 SciFest

With a new alumni symposium in the morning and a poster session filling three floors of the Science Center atrium in the afternoon, this year’s SciFest IX set a new standard for Brandeis Science’s annual celebration of undergraduate research.


Photos: Heratch Ekmekjian

Since 2011, a poster session featuring the results from ongoing projects belonging to undergraduates doing science research has been the high point of summer in the Division of Science at Brandeis. This year, for the first time, we invited Brandeis alumni scientists to speak in a morning symposium entitled “A Celebration of Brandeis’ Undergraduate Science Education”, including:

Students and faculty in the audience were treated to a history of Brandeis and reflections on many of the Brandeis professors and courses that set them on their career path and whose influence persists to the present in how they approach their science, and on lessons they learned that continue to guide their work.

After lunch in the campus center, the crowd climbed up to the Shapiro Science Center for the poster session. 123 students presented 117 posters on topics from high-energy physics to biomaterials and from quantum chemistry to fruit fly behavior. As President Ron Liebowitz noted in an email to the Science community after the event:

The energy in Shapiro during the poster session was electric.  The students’ confidence and excitement over sharing their research can only give us great optimism about the future: they are “all in” when it comes to doing basic research, but also seeing how such research can be applied in the name of helping others.

Many of the posters can be found in the hallway in Gerstenzang – look for them when classes start again in a few weeks!

SciFest IX by the numbers

  • 117 posters
  • 123 student presenters (out of approx. 210 summer student researchers)
    • 105 Brandeis students
      • 99 presenting research done on campus
      • 6 presenting work done over the summer off-campus
    • 18 visiting students
  • 45 Brandeis faculty advisors from 7 departments
    • Biochemistry (7)
    • Biology (18)
    • Chemistry (8)
    • Computer Science (1)
    • Physics (6)
    • Psychology (5)
    • Sociology (1)

Even Dankowicz is named 2019 Goldwater Scholar

Even Dankowicz, fly image

photo: Even Dankowicz

Even Dankowicz, a rising senior majoring in Biology, has been named a 2019 Goldwater Scholar. The Goldwater Scholarship is a national scholarship designed to encourage outstanding students in their sophomore and junior year to pursue research careers in the fields of mathematics, the natural sciences, and engineering.

He has always been particularly interested in animals (including insects), but it was a high school biology teacher that inspired Even to think more seriously about working with insects. “Insects and other arthropods seemed especially worth studying because they are disproportionately diverse and abundant, making up ~95% of the species I found in my yard. Up close, they are also often exceptionally beautiful.” The image above is one of his favorites – it is a wasp-like flower fly from his yard in Illinois.

After his freshman year at Brandeis, Even spent the summer at the Smithsonian revising the taxonomy of a tropical Asian Mydas-fly genus, discovering six new species. Last summer he worked at Harvard on a gene-sequence-based evolutionary tree of a tropical Asian butterfly genus. He has continued to be involved with both of these projects/research groups, and is currently back at the Smithsonian looking at the comparative morphology of fly pupae.

Along with Colleen Hitchcock, Assistant Professor of Ecology, Even worked on local biodiversity-focused citizen science, which has shown him the potential value of this data and motivated him to curate insect observations on iNaturalist and BugGuide, two citizen science websites. Even (with Chris Cohen from East Carolina University) recently contributed an article to Fly Times titled “Diptera and iNaturalist: A case study from Asiloidea”. The article provides a detailed description of iNaturalist. Dankowicz and Cohen used this platform extensively for their studies in Diptera.

In the future, Even says that he thinks he’d like to keep working with insects, “either to understand their evolution or another aspect of their biology.” This spring, Even took an class on evolutionary developmental biology (evo-devo) with Assistant Professor Maria de Boef Miara, which has been useful in his current project at the Smithsonian. Additionally, he is starting to work on applications for graduate school next year.

Sadelin & Campana Receive 2019 Gabbay Award on October 2

2019 Gabbay Award winners

Michel Sadelain, the director of the Center for Cell Engineering at the Memorial Sloan Kettering Cancer Center (MSKCC), and Dario Campana, a professor of pediatrics at the Yong Loo Lin School of Medicine at the National University of Singapore (NUS) will receive the 2019 Jacob and Louise Gabbay Award in Biotechnology and Medicine on Wednesday, October 2, 2019 at 4:00 PM at Shapiro Campus Center Theater. Michel Sadelin and Dario Campana will deliver a talk at that time.

Both scientists receive the Gabbay Award this year for their research into CAR T-cell therapy that has resulted in breakthrough cancer treatments.

The Gabbay Award was created in 1998 by the Jacob and Louise Gabbay Foundation in order to recognize scientists working in academia, medicine or industry for their outstanding achievements developing scientific content and significant results in the biomedical sciences.

Read more at BrandeisNow.

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