CaMKII: some basics to remember

The theme of Thursday’s Volen Center for Complex Systems annual retreat will be Breakthroughs in understanding the role of CaMKII in synaptic function and memory and honors the pioneering work of John Lisman. To help bring non-experts up to speed, we asked Neuroscience Ph.D. students Stephen D. Alkins and Johanna G. Flyer-Adams from the Griffith lab at Brandeis for a quick primer on CaMKII.

What’s a protein kinase? 

Protein kinases are enzymes that act by adding phosphate groups to other proteins – a process called phosphorylation. Phosphorylation of a protein usually initiates a cascade of downstream effects such as changes in the protein’s 3D shape,  changes in its interactions with other proteins, changes in its activity and changes in its localization. In causing these types of changes, kinases facilitate some of the most essential cellular and molecular processes required for survival and proper functionality.

Aren’t there lots of protein kinases? What makes CaMKII special? 

Among the roughly 500+ genes in the human genome encoding protein kinases, a kinase known as calcium (Ca2+)/calmodulin-dependent protein kinase II (CaMKII) phosphorylates serine or threonine residues in a broad array of target proteins.  Though found in many different tissues (skeletal muscle, cardiac muscle, spleen, etc.), there is a lot of CaMKII in the brain– about 1% of total forebrain protein and 2% of total hippocampal protein (in rats). Previous research, including pivotal contributions from the Lisman Lab at Brandeis University working in mammalian brain, has identified CaMKII as a cellular and molecular correlate of learning and memory through its multiple roles governing normal neuronal structure, synaptic strength, plasticity, and homeostasis. The Griffith Lab has been instrumental in demonstrating that these roles of the kinase are conserved in invertebrates.

Why do we think CaMKII might play a role in memory?

a) Location!

As previously mentioned, CaMKII accounts for up to 2% of all proteins in memory-important brain regions like the hippocampus. It’s also highly abundant at neuronal synapses, where neurons communicate with each other.

b) Function!

Memory is thought to require a process called long term potentiation (LTP) where two neurons, in response to environmental changes, will change the strength of the synaptic connections by which they communicate with each other—these changes will last even after the environmental input has disappeared. We know that CaMKII is required for LTP. We also know that the increases in neuronal calcium levels that accompany neuronal activation and cause LTP also allow CaMKII to phosphorylate itself. This autophosphorylation of CaMKII changes its kinase activity so that CaMKII can stay active well past the window of neuronal activation, essentially ‘storing’ the memory of previous neuronal activity—much like LTP!

c) Structure!

Ultimately, the issue with ‘molecular memory’ is that all proteins degrade over time, causing one to ask how we can remember things for so long when the original proteins that stored that memory no longer exist. CaMKII is such an exciting candidate for molecular memory because it is mostly found as a dodecameric holoenzyme—this means that CaMKII likes to exist as a big assembly of twelve identical CaMKII subunits. However, each CaMKII subunit retains its kinase activity even when all twelve are assembled. What’s interesting is that the autophosphorylation and activation of one CaMKII subunit (which happens when neurons are activated and intracellular calcium levels rise) actually makes it easier for the other CaMKII subunits in the twelve-unit holoenzyme to become autophosphorylated and activated. This means that maybe when an activated subunit is old and get degraded, another new CaMKII subunit could take its place among the twelve-unit holoenzyme—and become activated just like the old subunit, allowing for the ‘molecular memory’ to last beyond when proteins degrade!

CaMKII phosphorylation and activationCaMKII in more detail…

Calcium binds to the small protein calmodulin and forms (Ca2+/CaM), which acts as a ‘second messenger’ that increases in concentration when neurons are activated. CaMKII relies on calcium/calmodulin (Ca2+/CaM) binding to activate an individual domain containing a regulatory segment.  In conditions of low calcium, elements within the CaMKII regulatory segment will have less affinity for (Ca2+/CaM) binding, keeping CaMKII in an autoinhibited state.  In conditions of high calcium, (Ca2+/CaM) binding initiates phosphorylation at three threonine residue sites, including Thr286 which prevents rebinding of the regulatory segment, thus keeping CaMKII constitutively active even when calcium levels fall.  In this activated state CaMKII can autophosphorylate inactivated intra-kinase domains, and will undergo subunit exchange with neighboring inactivated CaMKII holoenzymes. Furthermore, mutation of CaMKII residues or binding sites in target proteins, such as postsynaptic glutamate (AMPA) receptors, disrupts establishment of long-term potentiation (LTP) in neurons.  Together, CaMKII’s role as molecular switch that bidirectionally, and autonomously regulates activity in neurons has earned it the illustrious title of a “memory molecule.”

What amino-acid manipulations might I hear about?

a) T286A:

Changing a threonine in a phosphorylation site to an alanine prevents phosphorylation at that site. Blocking Thr286 phosphorylation with a T286A mutation prevents CaMKII generation of autonomous activity that disrupts neuronal activity and results in learning deficits.

b) T286D:

Changing a threonine to an aspartate puts a negative charge at the site, often making it act like it’s always phosphorylated. In the case of CaMKII, a T286D mutation renders the kinase constitutively active, which can interrupt normal LTP induction and normal memory storage and acquisition.

To learn more:

Greater Boston Area Statistical Mechanics Meeting on Oct 24

Brandeis will host the 17th annual Greater Boston Area Statistical Mechanics Meeting (GBASM) on Saturday, October 24, 2015, from 9:30-3:00. GBASM brings together researchers interested in statistical mechanics, nonlinear dynamics, condensed matter physics, biophysics, and related topics for a day-long workshop.  The meeting consists of four invited talks (30 min.), and a larger number of contributed “table talks”. The invited speakers for 2015 are:

Contributed talks will follow the format adopted the last two years. Contributors will give a brief announcement of their work in the lecture hall. We will then move to the adjacent room where each contributor will sit at a table with their laptop or tablet and discuss their research with interested participants. This format eliminates the expense associated with posters and provides greater feedback to contributors. The time preparing for a “table talk” should be similar to preparing for a short talk.

GBASM Sponsors for 2015 include the Materials Research Science and Engineering Center, Brandeis University; the Department of Physics, Boston University; the Materials Research Science and Engineering Center, Harvard University; the Department of Physics, UMASS Amherst; and the Department of Chemistry, MIT. Thanks to these subsidies, bagels, coffee, tea, and lunch will be provided at no cost if you register for GBASM by the deadline of Saturday, Oct 17.

IGERT Summer Institute – July 27 to August 7, 2015

IGERTBrandeis is hosting a two-week summer institute for graduate students in the mathematical sciences from July 27-August 7.  This will combine the annual summer institute of Brandeis’ Geometry and Dynamics IGERT program, with a sequel to the US-India Advanced Studies Institute on thermalization, held two years ago in Bangalore.

Topics:

  • Large deviation theory
  • Statistics of extreme events
  • The large N expansion in statistical and quantum physics
  • Statistical fluid dynamics
  • Quantum information and quantum gravity
  • Thermalization in Quantum Systems

Lecturers:

Sumit Das (U. Kentucky)
Chandan Dasgupta (IISC, Bangalore)
Rajesh Gopakumar (HRI, Allahabad and ICTS)
Alex Maloney (McGill University)
Satya Majumdar (LPTMS, Paris)
Sanjib Sabhapandit (Raman Research Institute, Bangalore)
Peter Weichman (BAE systems)

Organizers:

Albion Lawrence
Bulbul Chakraborty

Registration:

There will be no registration fee, but the venue will have limited capacity, so interested students should register by sending an email to Catherine Broderick (cbroderi@brandeis.edu) by July 4. Please list your affiliation, your year in graduate school, any publications, and the name of your PhD advisor.

Additional information can be found at www.brandeis.edu/igert/.

MRSEC Retreat, November 21, 2014

On Friday, November 21, 2014, the MRSEC will hold an on-campus retreat. The research goal of the MRSEC is to learn how materials are incorporated in biological systems and likewise how biological structures act as materials with highly desirable properties that can be exploited in engineering. The first part of the retreat will be a joint event with the Biochem/Biophys Friday seminar that takes place at 11:15am – 12:15pm. A lunch will be provided and in the afternoon there will be 3 talks by MRSEC students and postdocs. Wrapping up the day is a BREW session / social hour.

MRSEC Retreat Schedule Friday, November 21, 2014

11:15-12:15 pm Gerstenzang 121 (Talks: Avi Rodal & Zvonimir Dogic) “Membrane Based Materials”
12:30-1:30 pm Shapiro Campus Center 236, 2nd Floor (Lunch)
1:30-2:30 pm Shapiro Campus Center Theater, 1st Floor (Talks: Fiodar Hilitski, Adam Johnston, Ye Zhang)
2:30-4:30 pm Shapiro Campus Center Art Gallery 317, 3rd Floor (BREW: Denise LeBlanc, Steve DeCamp)
BREW: Brainstorming Research Education Workshop. We will identify the most exciting research conducted by the MRSEC and design a hands-on activity to be presented at the Acton Discovery Museum that is suitable for 4 – 8 year old children and their parents.

Greater Boston Area Statistical Mechanics Meeting, Nov 8

Brandeis will host the 16th annual Greater Boston Area Statistical Mechanics Meeting (GBASM) on Saturday, Nov. 8, 2014, from 9:30-3:00. GBASM is a workshop that brings together researchers interested in statistical mechanics, nonlinear dynamics, condensed matter physics, biophysics, and related topics for a day of presentations and discussions.  The meeting consists of four invited talks (30 min.), and a larger number of contributed “table talks”.

The four invited speakers for this year are:

The contributed talks will follow the format we adopted last year. Instead of three minute talks with a limited time for questions, contributors will give a brief announcement of their work in the lecture hall. We will then move to the adjacent room where each contributor will sit at a table with their laptop or tablet and discuss their research with interested participants. This format will eliminate the expense associated with posters and provide greater feedback to contributors. The time preparing for a “table talk” should be similar to preparing for a short talk.

The cost of the meeting is subsidized by the Materials Research Science and Engineering Center, Brandeis University; the Department of Physics, Boston University; the Materials Research Science and Engineering Center, Harvard University. Thanks to these subsidies, bagels, coffee, tea, and lunch will be provided at no cost if you register by the deadline of Saturday, Nov. 1.

More information   |  Registration

 

“Age, Hearing, and Speech Comprehension”: A Festschrift for Art Wingfield

artWingfieldBlogA one-day event will be held on July 22, 2014 at the Shapiro Campus Center Theater to honor Art Wingfield, the Nancy Lurie Marks Professor of Neuroscience, for his 40+ years of research and teaching at Brandeis. During his time at Brandeis, Art has made contributions to the areas of speech comprehension, cognitive aging, memory, and aphasia and has mentored numerous PhD students, research assistants and postdocs. Art has inspired countless other students in his course on Human Neuropsychology.

Some of the speakers will include former lab members and prominent researchers in the field:

  • Mark Eckert, Department of Otolaryngology,
    Medical University of South Carolina
  • Murray Grossman, Department of Neurology,
    University of Pennsylvania
  • Stefanie Kuchinsky, Center for Advanced Study of Language,
    University of Maryland
  • Jonathan Peelle, Department of Otolaryngology, Washington University in St. Louis
  • Kathy Pichora-Fuller, Department of Psychology, University of Toronto Mississauga
  • Robert Remez , Department of Psychology, Columbia University
  • Bruce Schneider, Department of Psychology, University of Toronto Mississauga
  • Liz Stine-Morrow, Department of Educational Psychology and Beckman Institute, University of Illinois, Urbana-Champaign

For more information about this event can be found at www.artwingfieldfest.com/.

If you are interested in attending, please register at by July 5th.

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