Active Matter workshop on Feb 20, 2013

Ever wondered what do bacterial colonies, algae, the cytoskeleton of a cell and self-diffusive colloids have in common? They are all examples of active materials! What are active materials? What makes them special?

The Brandeis Materials Research Science and Engineering Center will host a hands-on workshop on Active Matter on Wednesday, Feb. 20, 2013. The workshop involves experiments, simulations and theory, together with an overview of active materials research at the Brandeis MRSEC. It will be held in Shapiro Science Center from 9:00 am – 7:30 pm. Prof. Azadeh Samadani is hosting the workshop. The application deadline is Jan. 10, 2013 – apply here.

Summer undergraduate research fellowships for 2013

The Division of Science wishes to announce that, in 2013, we will again offer up to ten Division of Science Summer Undergraduate Research Fellowships for Brandeis students doing undergraduate research.  These fellowships are funded by generous alumni donations.

The due date for applications is February 15, 2013

Division of Science Summer Undergraduate Research Fellowships will provide $5000 in stipend support to allow students to do summer research (housing support is not included). Students who will be rising Brandeis sophomores, juniors, or seniors in Summer 2013 (classes of ’14, ’15, and ’16), who in addition are working in a lab in the Division of Science at the time of application, are eligible to apply. A commitment from a Brandeis faculty member to serve as your mentor in Summer 2013 is required.

The Division of Science Summer Program will run from May 29 – Aug 2, 2013. Recipients are expected to be available to do full time laboratory research during that period, and must commit to presenting a poster at the final poster session on Aug 1, 2013.

The application form is online (Brandeis login required). Questions may be addressed to Steven Karel <karel@brandeis.edu>.

Other programs available in 2013 will include the two NSF-funded REU programs sponsored by the MRSEC and the Program in Cell and Molecular Visualization. The REU programs are primarily aimed at students visiting for the summer from other institutions. There are also Traineeships for Undergraduates in Computational Neuroscience through a grant from the National Institute on Drug Abuse. The computational neuroscience traineeships run through the summer and continue into the academic year.

Ye Zhang wins Materials Research Society Poster Award

Ye Zhang, a Postdoctoral Fellow from Prof. Bing Xu’s research group at Brandeis, won the 2012 MRS Fall Meeting Poster Awards for her poster titled Self-oscillatory Hydrogels Driven by Belousov-Zhabotinsky Reaction within the symposium on Bioinspired Directional Surfaces-From Nature to Engineered Textured Surfaces & Precision Polymer Materials-Fabricating Functional Assemblies, Surfaces, Interfaces, and Devices. The goal of the project is to make materials that operate like synthetic cardiac or intestinal muscles; feed them and they will pump forever, or as long as the arteries remain open. Ye, the poster’s lead author, is a member of the Brandeis Materials Research Science and Engineering Center (MRSEC) working on project involving the groups of Profs. Bing Xu, Irving Epstein and Seth Fraden of the Chemistry and Physics Departments.

Ye’s work focuses on the development and study of active matter based on non-linear chemical dynamics, specifically the Belousov-Zhabotinsky reaction. Beginning two years ago she systematically modified a class of gels that exhibit periodic volume oscillations which were produced by other groups. First, Ye succeeded in significantly improving the amplitude of volume oscillations. Next, she developed several novel self-oscillatory systems and established a systematic way to improve the bulk material properties of the synthetic heart.  To build a reliable beating heart, Ye optimized the molecules building the material at the molecular level of tens to hundreds of atoms, or scales of 1 nm and then figured out how to assemble them into networks of polymers on the scales of 10 – 100 nm, and then further assembled them on a longer length scale, into elastic networks on the scales of microns, and finally sculpted the resulting rubbery materials using photolithographic and microfluidic methods into useful shapes for study and application. Ye’s award is a recognition of her contribution to molecular engineering and serves as a quintessential example of the  “bottom-up” construction methods exemplified by the interdisciplinary teams of the Brandeis MRSEC.

Yo Ho, Yo Ho! A Brandeis Science Pirate’s Life for Me

Ahoy mateys! Greetings from the Acton Discovery Museum.  With sponsorship by the Brandeis Materials Research and Engineering Center (MRSEC), Division of Sciences undergraduate and graduate students, post docs and faculty pirates took a journey down to the Discovery Museum and interacted with those visitors who dared board our ship on November 18th.

Our visitors ranged in age from pre-school to middle school, and all those who came to see us joined our cause and wore eye patches. These “new” pirates were given mini telescopes and museum maps to navigate how to get to the pirate stations across the high seas of the museum. Our visitors collaborated with their families to figure out which direction they were going in the museum using the compasses placed strategically (at visitor eye level) throughout the exhibits. When the new young science pirates found their way, some had to walk the plank with eyes open and closed, experiencing what it would like to be actually at sea. Afterwards, they learned how our ear physiology helps us keep our balance, especially when aboard a shaky vessel.

Others got to see how far they could throw objects and understand the projectile motion behind cannons on pirate ships and test object density with dry ice and balloons. Some young pirates tried to balance buried treasure coins in aluminum foil boats, and others tested their ability to make a variety of pirate-approved knots with rope. Of course, many our visitors discovered their favorite amino acid was ARGGGGG-inine. We can’t wait to return in the spring and teach more visitors at the upcoming “Indiana Jones and the Temple of Science” exhibit! For more information or to participate in our Discovery Museum events, please contact Melissa Kosinski-Collins (kosinski<at>brandeis.edu)

Amanda Winn ’13 is a Biology major, undergraduate teaching assistant in the General Biology lab, and occasional science pirate.

Materials in Motion: Engineering Bio-Inspired Motile Matter

Life is on the move! Motion is ubiquitous in biology. From the gargantuan steps of an elephant to the tiniest single celled amoeba, movement in biology is a complex phenomenon that originates at the cellular level and involves the organization and regulation of thousands of proteins. These proteins do everything from mixing the cytoplasm to driving cell motility and cell division. Deciphering the origins of motion is no easy feat and scientists have been studying such complex behavior for quite some time. With biology as an inspiration, studying these complex behaviors provides insight into engineering principals which will allow researchers to develop an entirely new category of far-from-equilibrium materials that spontaneously move, flow or swim.

In a recent report in the journal Nature, a team of researchers from Brandeis University consisting of Tim Sanchez, Daniel T. N. Chen, Stephen J. DeCamp, Michael Heymann, and Zvonimir Dogic have constructed a minimal experimental system for studying far-from-equilibrium materials. This system demonstrates the assembly of a simple mixture of proteins that results in a hierarchy of phenomena. This hierarchy begins with extending bundles of bio-filaments, produces networks that mix themselves, and finally culminates in active liquid crystals that impart self-motility to large emulsion droplets.

Their system consists of three basic components: 1) microtubule filaments, 2) kinesin motor proteins which exert forces between microtubule filaments, and 3) a depletion agent which bundles microtubule filaments together. When put together under well-defined conditions, these components form bundled active networks (BANs) that exhibit large-scale spontaneous motion driven by internally generated active stresses. These motions, in turn, drive coherent fluid flows. These features bear a striking resemblance to a biological process called cytoplasmic streaming, in which the cellular cytoskeleton spontaneously mixes its content. Additionally, the system has great potential for testing active matter theories because the researchers can precisely tune the relevant system parameters, such as ATP and protein concentration.

 

The researchers also demonstrate the utility of this biologically-inspired synthetic system by studying materials science topics that have no direct biological analog. Under dense confinement to an oil-water interface, microtubule bundles undergo a spontaneous transition to an aligned state. Soft matter physics describes such materials as liquid crystals, which are the materials used to make liquid crystal displays (LCDs). These active liquid crystals show a rich variety of dynamical behavior that is totally inaccessible to their equilibrium analogs and opens an avenue for studying an entirely new class of materials with highly desirable properties.

Lastly, inspired by streaming flows that occur in cells, the researchers encapsulate the bundled active networks into spherical emulsion droplets. Within the droplet, microtubules again formed a self-organized nematic liquid crystal at the oil-water interface. When the droplets were partially squished between glass plates, the streaming flows generated by the dynamic liquid crystals lead to the emergence of spontaneous self-motility.

This research constitutes several important advances in the studies of the cytoskeleton, non-equilibrium statistical mechanics, soft-condensed matter, active matter, and the hydrodynamics of fluid mixing. The researchers have demonstrated the use of biological materials to produce biomimetic functions ranging from self-motility to spontaneous fluid flows using fundamentally new mechanisms. Additionally, the experimental system of bundled active microtubules is poised to be a model for exploring the physics of gels, liquid crystals, and emulsions under far-from-equilibrium conditions.

To see more videos from the Dogic lab at Brandeis University, check out their YouTube page.

Materials Science poster session

The NSF funded Materials Research Science & Engineering Center (MRSEC) received its 5 year review on Oct 11-12, 2012 when a panel of 5 scientists and 2 NSF officials visited Brandeis and kicked the tires of our Center. The highlight of the review was lunch between the panelists and 20 MRSEC graduates students and postdocs and the poster session, shown here, in which 30 posters describing research in the Center was presented to the panel. The four MRSEC thrusts were represented in the poster session: Active Matter, Chiral Self-Assembly, Oscillating Chemical Dynamics, and Confined Polymers, plus posters on our Seeds and Facilities. Join us again in Spring for our on-campus retreat.
 
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